[galaxy-user] GATK

[Jennifer Jackson]

Hi Danny,

A beta GATK pipeline is available on our Test instance at: 
http://test.g2.bx.psu.edu/

Feedback about the tool suite is welcomed!

Best,

Jen
Galaxy team

On 10/27/11 1:08 PM, Muehlschlegel, Jochen D.,M.D. wrote:
> Hi,
>
> Do you host GATK on the Galaxy server? If not, is there a way to call SNPs from NGS (RNA-seq) data using Galaxy ?
>
> Thanks
>
> Danny
>
>
>
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-- 
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/wiki/Support