[galaxy-user] Adding new tools in Galaxy
Dannon Baker
dannonbaker at me.com
Thu Oct 6 07:53:34 EDT 2011
Makais,
Any type of command line tool, whether script or a binary executable, can be used by Galaxy as long as it's properly installed on the system and accessible to the Galaxy user.
See http://wiki.g2.bx.psu.edu/Admin/Tools/Tool%20Config%20Syntax#A.3Ccommand.3E_tag_set for more details on how you might call a compiled executable.
Thanks for using Galaxy,
-Dannon
On Oct 6, 2011, at 7:44 AM, Makis Ladoukakis wrote:
> Dear Galaxy developers,
>
> Currently I am adding new tools to my galaxy instance as scripts written in Perl language. I was wandering if there is a way to add tools either as .bin or .exe format or if only scripts are supported. I couldn't find anything about it in the wiki or in the FAQ.
>
> Thank you,
> Makis Ladoukakis
> ___________________________________________________________
> The Galaxy User list should be used for the discussion of
> Galaxy analysis and other features on the public server
> at usegalaxy.org. Please keep all replies on the list by
> using "reply all" in your mail client. For discussion of
> local Galaxy instances and the Galaxy source code, please
> use the Galaxy Development list:
>
> http://lists.bx.psu.edu/listinfo/galaxy-dev
>
> To manage your subscriptions to this and other Galaxy lists,
> please use the interface at:
>
> http://lists.bx.psu.edu/
More information about the galaxy-user
mailing list