[galaxy-user] TopHat/Cufflinks visualization

shamsher jagat kanwarjag at gmail.com
Wed Nov 9 14:50:39 EST 2011


Ues IGV  or Galaxy tracker.


On Wed, Nov 9, 2011 at 9:37 AM, Alessia D <ad2405 at gmail.com> wrote:

> How do people on this mailing list usually visualize Tophat and/or
> Cufflinks results (eg. tracks on UCSC browser)?
>
> I have only this once before, and I started with a .wig file that I
> uploaded to the genome browser, however it looks like Tophat does not give
> any .wig file in the output.  Suggestions?
>
> Thanks!
>
> A
>
>
>
>
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