March 2011 Archives by author

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Starting: Tue Mar 1 04:32:23 EST 2011
Ending: Thu Mar 31 23:36:19 EDT 2011
Messages: 204

• [galaxy-user] Postdoc position   Abderrahman Khila, Dr
• [galaxy-user] Galaxy on Cloud not recognizing .txt files as fastq   Enis Afgan
• [galaxy-user] Galaxy on Cloud not recognizing .txt files as fastq   Enis Afgan
• [galaxy-user] dataflow using Galaxy on Amazon EC2   Enis Afgan
• [galaxy-user] dataflow using Galaxy on Amazon EC2   Enis Afgan
• [galaxy-user] dataflow using Galaxy on Amazon EC2   Enis Afgan
• [galaxy-user] server error trying to DL data from galaxy on cloud   Enis Afgan
• [galaxy-user] server error trying to DL data from galaxy on cloud   Enis Afgan
• [galaxy-user] server error trying to DL data from galaxy on cloud   Enis Afgan
• [galaxy-user] Upload file size and user authorization   Paul-Michael Agapow
• [galaxy-user] Upload file size and user authorization   Paul-Michael Agapow
• [galaxy-user] Recall: Upload file size and user authorization   Paul-Michael Agapow
• [galaxy-user] Recall: Upload file size and user authorization   Paul-Michael Agapow
• [galaxy-user] CpG Masking changing alignment length?   Guru Ananda
• [galaxy-user] GTF-to-GFF3   Florent Angly
• [galaxy-user] Combining the paired reads from Illumina run   Florent Angly
• [galaxy-user] local directory   Albert Ayoub
• [galaxy-user] LASTZ: Controlling Length of Hits   JASON G. BANKERT
• [galaxy-user] Galaxy on Cloud not recognizing .txt files as fastq   Dannon Baker
• [galaxy-user] postgreSQL 9.0.3 / JSONDecodeError error   Dannon Baker
• [galaxy-user] postgreSQL 9.0.3 / JSONDecodeError error   Dannon Baker
• [galaxy-user] is galaxy down?   Dannon Baker
• [galaxy-user] Galaxy down   Dannon Baker
• [galaxy-user] Import data in RGenetics   Daniel Blankenberg
• [galaxy-user] Galaxy on Cloud not recognizing .txt files as fastq   Daniel Blankenberg
• [galaxy-user] FASTQ to FASTQSanger using Groomer question   Daniel Blankenberg
• [galaxy-user] history   Daniel Blankenberg
• [galaxy-user] LASTZ: Controlling Length of Hits   Bossers, Alex
• [galaxy-user] Around Pittsburgh on April 6? Attend the Intro to Galaxy Sessions @ Pitt   Bottoms, Christopher A
• [galaxy-user] where to get indexes for mapping tools   Yury Bukhman
• [galaxy-user] FASTQ to FASTQSanger using Groomer question   Eric Cabot
• [galaxy-user] cufflinks FPKM   Che, Anney (NIH/NCI) [E]
• [galaxy-user] Pseudo Autosomal regions in Chrs X and Y   Hiram Clawson
• [galaxy-user] [Genome] UCSC browser, access from Galaxy   Hiram Clawson
• [galaxy-user] irc channel for galaxy   Dave Clements
• [galaxy-user] Workshop on Comparative Genomics, North America 2011   Dave Clements
• [galaxy-user] Around Pittsburgh on April 6? Attend the Intro to Galaxy Sessions @ Pitt   Dave Clements
• [galaxy-user] local directory   Peter Cock
• [galaxy-user] FASTQ to FASTQSanger using Groomer question   Peter Cock
• [galaxy-user] Convert SOLiD data   Peter Cock
• [galaxy-user] Brad Chapman 's tool   Peter Cock
• [galaxy-user] Bowtie Job doesn't start   Nate Coraor
• [galaxy-user] Export data to filesystem   Nate Coraor
• [galaxy-user] Galaxy down?   Nate Coraor
• [galaxy-user] Galaxy server-FTP   Nate Coraor
• [galaxy-user] FASTQ to FASTQSanger using Groomer question   David K Crossman
• [galaxy-user] biomart plugin   Andrea Edwards
• [galaxy-user] biomart plugin   Andrea Edwards
• [galaxy-user] Map with Bowtie job is waiting to run for more than 1 hour...   Daniel Fernandez
• [galaxy-user] Map with Bowtie job is waiting to run for more than 1 hour...   Daniel Fernandez
• [galaxy-user] history   Fuchs, Tania
• [galaxy-user] library features   Belinda M. Giardine
• [galaxy-user] storage space/processor speed   Keith E. Giles
• [galaxy-user] is galaxy down?   Keith E. Giles
• [galaxy-user] how to find out the gene_ID correspond to CUFF ID   Jeremy Goecks
• [galaxy-user] Extract sequences from [gtf file] + [genome FASTA file]   Jeremy Goecks
• [galaxy-user] [galaxy-bugs] Cufflinks issue   Jeremy Goecks
• [galaxy-user] [galaxy-bugs] Cufflinks issue   Jeremy Goecks
• [galaxy-user] downstream analysis of cuffdiff out put   Jeremy Goecks
• [galaxy-user] extracting raw count data from mapping   Jeremy Goecks
• [galaxy-user] GTF-to-GFF3   Jeremy Goecks
• [galaxy-user] HMM tool in Galaxy??   Jeremy Goecks
• [galaxy-user] Trouble with RNAseq analysis   Jeremy Goecks
• [galaxy-user] Trouble with RNAseq analysis   Jeremy Goecks
• [galaxy-user] Trouble with RNAseq analysis   Jeremy Goecks
• [galaxy-user] Trouble with RNAseq analysis   Jeremy Goecks
• [galaxy-user] Trouble with RNAseq analysis   Jeremy Goecks
• [galaxy-user] cufflinks FPKM   Jeremy Goecks
• [galaxy-user] cufflinks FPKM   Jeremy Goecks
• [galaxy-user] Convert SOLiD data   Ryan Golhar
• [galaxy-user] Sort & index SAM-files automatically   Ryan Golhar
• [galaxy-user] labeling sections of the history   Ryan Golhar
• [galaxy-user] Gene Fusion Detection Workflow   Ryan Golhar
• [galaxy-user] upload of Zea mays genome to galaxy?   Felix Hammer
• [galaxy-user] Bowtie Job doesn't start   Felix Hammer
• [galaxy-user] Cleaning of fastq files   Felix Hammer
• [galaxy-user] Galaxy down?   Felix Hammer
• [galaxy-user] Galaxy down   Felix Hammer
• [galaxy-user] LASTZ: Controlling Length of Hits   Bob Harris
• [galaxy-user] LASTZ: Controlling Length of Hits   Bob Harris
• [galaxy-user] GFF3 and metagenome data?   Thomas Haverkamp
• [galaxy-user] dataflow using Galaxy on Amazon EC2   Luqman Hodgkinson
• [galaxy-user] Around Pittsburgh on April 6? Attend the Intro to Galaxy Sessions @ Pitt   Iyer, Lakshmanan "Lax" K
• [galaxy-user] Problems using aaChanges tool   Jennifer Jackson
• [galaxy-user] Join and Sort in Galaxy   Jennifer Jackson
• [galaxy-user] upload large data set   Jennifer Jackson
• [galaxy-user] Map with Bowtie job is waiting to run for more than 1 hour...   Jennifer Jackson
• [galaxy-user] Fwd: Need a generous help regarding uploading   Jennifer Jackson
• [galaxy-user] Adding the Hydra genome to Galaxy   Jennifer Jackson
• [galaxy-user] [galaxy-bugs] For small RNA analysis   Jennifer Jackson
• [galaxy-user] Adding the Hydra genome to Galaxy   Jennifer Jackson
• [galaxy-user] Cleaning of fastq files   Jennifer Jackson
• [galaxy-user] Problem Adding a Custom Build in Trackster   Jennifer Jackson
• [galaxy-user] Fwd: Question about FTP   Jennifer Jackson
• [galaxy-user] Problems with the Groomer   Jennifer Jackson
• [galaxy-user] Cleaning of fastq files   Jennifer Jackson
• [galaxy-user] CpG Masking changing alignment length?   Jennifer Jackson
• [galaxy-user] CpG Masking changing alignment length?   Jennifer Jackson
• [galaxy-user] fastq / nucleotides distribution graph   Jennifer Jackson
• [galaxy-user] Pseudo Autosomal regions in Chrs X and Y   Jennifer Jackson
• [galaxy-user] A genbank to gtf converter   Jennifer Jackson
• [galaxy-user] Tophat version   Jennifer Jackson
• [galaxy-user] Convert SOLiD data   Jennifer Jackson
• [galaxy-user] Convert SOLiD data   Jennifer Jackson
• [galaxy-user] galaxy-user Digest, Vol 57, Issue 26   Jennifer Jackson
• [galaxy-user] Problems using aaChanges tool   Jennifer Jackson
• [galaxy-user] Pseudo Autosomal regions in Chrs X and Y   Jennifer Jackson
• [galaxy-user] labeling sections of the history   Jennifer Jackson
• [galaxy-user] aaChanges / BED-to-Codon   Jennifer Jackson
• [galaxy-user] fastq / nucleotides distribution graph   Christophe Klopp
• [galaxy-user] cufflinks FPKM   Paul Korir
• [galaxy-user] library features   Greg Von Kuster
• [galaxy-user] biomart plugin   Greg Von Kuster
• [galaxy-user] galaxy-user Digest, Vol 57, Issue 26   Brian Lam
• [galaxy-user] Requesting your help for a Survey on data privacy while using workflows   Kevin Lam
• [galaxy-user] Question regarding quality filtering of 454 amplicons   Jackie Lighten
• [galaxy-user] Export data to filesystem   James Lindsay
• [galaxy-user] irc channel for galaxy   George Marselis
• [galaxy-user] Unsubscription   Massimo
• [galaxy-user] how to find out the gene_ID correspond to CUFF ID   David Matthews
• [galaxy-user] how to find out the gene_ID correspond to CUFF ID   David Matthews
• [galaxy-user] downstream analysis of cuffdiff out put   David Matthews
• [galaxy-user] Pseudo Autosomal regions in Chrs X and Y   David Matthews
• [galaxy-user] Tophat version   David Matthews
• [galaxy-user] A genbank to gtf converter   David Matthews
• [galaxy-user] A genbank to gtf converter   David Matthews
• [galaxy-user] Pseudo Autosomal regions in Chrs X and Y   David Matthews
• [galaxy-user] Pseudo Autosomal regions in Chrs X and Y   David Matthews
• [galaxy-user] output file for bowtie suppressed reads (-m/--max)   David Matthews
• [galaxy-user] Around Pittsburgh on April 6? Attend the Intro to Galaxy Sessions @ Pitt   David Matthews
• [galaxy-user] Upload file size and user authorization   Pieter Neerincx
• [galaxy-user] Upload file size and user authorization   Pieter Neerincx
• [galaxy-user] [galaxy-bugs] raw data reads in Galaxy   Anton Nekrutenko
• [galaxy-user] Fwd: [galaxy-bugs] to view raw data in ucsc browser   Anton Nekrutenko
• [galaxy-user] history   Anton Nekrutenko
• [galaxy-user] history   Anton Nekrutenko
• [galaxy-user] Combining the paired reads from Illumina run   Anton Nekrutenko
• [galaxy-user] Combining the paired reads from Illumina run   Anton Nekrutenko
• [galaxy-user] Combining the paired reads from Illumina run   Anton Nekrutenko
• [galaxy-user] Indel Output - what is this mystery column?   John David Osborne
• [galaxy-user] extracting raw count data from mapping   Austin Paul
• [galaxy-user] {Disarmed} extra hack to get own database connection to work?   Perdacher,Martin
• [galaxy-user] Regrading SNPs   Nripesh Prasad
• [galaxy-user] Fwd: Question about FTP   Cathy Riemer
• [galaxy-user] Sort & index SAM-files automatically   Jim Robinson
• [galaxy-user] Referencing data library directly from tool's input parameter dropdown.   Rodriguez, Aaron (NIH/NCI) [C]
• [galaxy-user] Trouble with RNAseq analysis   Cristian Rojas
• [galaxy-user] Trouble with RNAseq analysis   Cristian Rojas
• [galaxy-user] Trouble with RNAseq analysis   Cristian Rojas
• [galaxy-user] Around Pittsburgh on April 6? Attend the Intro to Galaxy Sessions @ Pitt   Saha, Rinku
• [galaxy-user] HMM tool in Galaxy??   Surya Saha
• [galaxy-user] HMM tool in Galaxy??   Surya Saha
• [galaxy-user] Combining the paired reads from Illumina run   Surya Saha
• [galaxy-user] Combining the paired reads from Illumina run   Surya Saha
• [galaxy-user] Combining the paired reads from Illumina run   Surya Saha
• [galaxy-user] Combining the paired reads from Illumina run   Surya Saha
• [galaxy-user] Combining the paired reads from Illumina run   Surya Saha
• [galaxy-user] integrating external Data Sources while running behind a firewall   Jelle Scholtalbers
• [galaxy-user] aaChanges / BED-to-Codon   Christopher Schroeder
• [galaxy-user] error on indel analysis   Evan Schwab
• [galaxy-user] Error on Indel Analysis Tool   Evan Schwab
• [galaxy-user] Mapping to only 3 genes / targeted resequencing / SOLiD4 / short reads   Jochen Seggewiß
• [galaxy-user] Sort & index SAM-files automatically   Jochen Seggewiß
• [galaxy-user] Sort & index SAM-files automatically   Jochen Seggewiß
• [galaxy-user] EMBOSS programs with graphical output(s)   Martin Senger
• [galaxy-user] integrating external Data Sources while running behind a firewall   Martin Senger
• [galaxy-user] integrating external Data Sources while running behind a firewall   Martin Senger
• [galaxy-user] postgres version 9.0.3   Martin Senger
• [galaxy-user] Convert SOLiD data   Sher, Falak
• [galaxy-user] Brad Chapman 's tool   Sher, Falak
• [galaxy-user] Galaxy server-FTP   Sher, Falak
• [galaxy-user] Adding the Hydra genome to Galaxy   Rob Steele
• [galaxy-user] Adding the Hydra genome to Galaxy   Rob Steele
• [galaxy-user] CpG Masking changing alignment length?   Michael E. Steiper
• [galaxy-user] CpG Masking changing alignment length?   Michael E. Steiper
• [galaxy-user] BED-to-GFF: option for gff3 format   Karen Tang
• [galaxy-user] GTF-to-GFF3   Karen Tang
• [galaxy-user] postgreSQL 9.0.3 / JSONDecodeError error   Vincent Le Texier
• [galaxy-user] upload of Zea mays genome to galaxy?   Kelly Vincent
• [galaxy-user] Indel Output - what is this mystery column?   Kelly Vincent
• [galaxy-user] upload of Zea mays genome to galaxy?   Kelly Vincent
• [galaxy-user] NR data for instantiation   Kelly Vincent
• [galaxy-user] How long does it take to use Groomer to convert illumina fastq to Sanger   Wong,Kwong K
• [galaxy-user] upload large data set   Yanji Xu
• [galaxy-user] how to find out the gene_ID correspond to CUFF ID   Ying Zhang
• [galaxy-user] how to find out the gene_ID correspond to CUFF ID   Ying Zhang
• [galaxy-user] upload of Zea mays genome to galaxy?   karlerhard at berkeley.edu
• [galaxy-user] upload of Zea mays genome to galaxy?   karlerhard at berkeley.edu
• [galaxy-user] Galaxy on Cloud not recognizing .txt files as fastq   karlerhard at berkeley.edu
• [galaxy-user] Galaxy on Cloud not recognizing .txt files as fastq   karlerhard at berkeley.edu
• [galaxy-user] Galaxy on Cloud not recognizing .txt files as fastq   karlerhard at berkeley.edu
• [galaxy-user] output file for bowtie suppressed reads (-m/--max)   karlerhard at berkeley.edu
• [galaxy-user] server error trying to DL data from galaxy on cloud   karlerhard at berkeley.edu
• [galaxy-user] server error trying to DL data from galaxy on cloud   karlerhard at berkeley.edu
• [galaxy-user] server error trying to DL data from galaxy on cloud   karlerhard at berkeley.edu
• [galaxy-user] Requesting your help for a Survey on data privacy while using workflows   vishal dwivedi
• [galaxy-user] Requesting your help for a Survey on data privacy while using workflows   vishal dwivedi
• [galaxy-user] Convert SOLiD data   lishiyong
• [galaxy-user] cufflinks FPKM   lishiyong
• [galaxy-user] cufflinks FPKM   lishiyong
• [galaxy-user] how to find out the gene_ID correspond to CUFF ID   vasu punj
• [galaxy-user] cufflinks FPKM   vasu punj
• [galaxy-user] showing content of 2 columns in select   andrew stewart
• [galaxy-user] NR data for instantiation   drhoads at uark.edu

Last message date: Thu Mar 31 23:36:19 EDT 2011
Archived on: Fri Apr 1 10:39:21 EDT 2011

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