[galaxy-user] Problem in uploading the DATA
asifullah111 at gmail.com
Wed Aug 18 02:17:26 EDT 2010
I am a new user to assemble 75bp illumina solexa data. I have done single
read illumina sequencing of my DNA of interest. it is a single file of about
370MB. The data, in file is initially in FASTQ format but letter the data
arrangement become in some different kind of FASTq format inside the file. I
want to convert the whole data in to simple FASTA format using GALAXY tools.
I see the interesting videos on your site about using galaxy and it seems
But here i fail to upload my 370MB data file as an initial step. I am using
100Mbp LANE networking. Are you people preferring any other special network
connection for uploading such huge files on GALAXY.? Kindly guide in this
Moreover Kindly if possible then send me simple perl script and there
command lines usage description for converting any format of FASTq in to
DNA sequencing Labs,
ICCBS, University of Karachi, Pakistan.
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