[galaxy-dev] custom builds as tool in toolbox panel?

[Michal Stuglik]

Dannon,


"Extract Genomic DNA" tool demands that intervals had set genome build. 
In my case interval dataset is not persistent, I generate this in 
"meantime", so after generating this I set genome build to dataset by 
hand. It's not a problem if you do this in "history pane mode" but in 
workflow mode it is, basically because it is not possible to set custom 
genome build as a parameter (external?) for intervals ( can I ?).

all the best,
michal

ps.
Sorry for late answer, It's Summer time :)


W dniu 13.07.2011 05:32, Dannon Baker pisze:
> Could you elaborate on how you'd see this working, and perhaps give a use case?  I'm not sure I follow what you mean.
>
> Thanks!
>
> -Dannon
>
> On Jul 7, 2011, at 3:57 AM, Michal Stuglik wrote:
>
>> hi,
>>
>>
>> Would it be possible to build in a "Custom builds" form user menu to toolbox panel as a tool?
>> Now it is not possible to use this feature in workflow ( as a part of pipeline)...
>>
>>
>> all the best,
>> michal
>>
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