[galaxy-dev] removing the "view in GeneTrack" link

[Hans-Rudolf Hotz]

On 04/08/2010 03:35 PM, Daniel Blankenberg wrote:
> Hi Hans,
>
> In datatypes_conf.xml remove or comment out the GeneTrack display.
> i.e. change occurrences of:
> <display file="genetrack.xml" />
> to
> <!--<display file="genetrack.xml" />  -->
>



D'oh!    of course   - thank you very much for the help


Hans


> Thanks,
>
> Dan
>
>
> On Apr 7, 2010, at 7:43 AM, Hotz, Hans-Rudolf wrote:
>
>> Hi
>>
>>
>> I fully appreciate the fact that the visualization module is still in
>> development - although, I am looking very much forward to use it.
>>
>>
>>
>> In the meantime, is there a way to remove the link "view in GeneTrack" you
>> get for all the BED files in your history?
>>
>>
>> I am running changeset 3545 and I have the following lines commented in my
>> 'universe_wsgi.ini' file:
>>
>>
>> # Uncomment following line below to enable visualization module
>> #enable_tracks = True
>>
>> # Comma separated list of UCSC / gbrowse browsers to use for viewing
>> #ucsc_display_sites = main
>> #gbrowse_display_sites = main
>> # Define your GeneTrack servers in
>> tool-data/shared/genetrack/genetrack_sites.txt
>> #genetrack_display_sites =
>>
>>
>> Nevertheless, I get a link like:
>>
>> http://galaxy-dev.fmi.ch/display_application/d12c5c8ceaef53e4/genetrack_inte
>> rval/genetrack
>>
>> which (if clicked on) results in an Error with the following message:
>> "Exception: A data display parameter is in the error state: genetrack_file"
>>
>>
>> I am running another course next week promoting the use of our local galaxy
>> server, and people will probably stumble across this broken link
>>
>>
>> Thank you very much for your help
>>
>> Hans
>>
>>
>>
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>> galaxy-dev at lists.bx.psu.edu
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>
>